Gene

taf5

ID
ZDB-GENE-051120-180
Name
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Symbol
taf5 Nomenclature History
Previous Names
  • wu:fc38g05
  • zgc:123129
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Orthologous to human TAF5 (TATA-box binding protein associated factor 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Leid et al., 2023
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With taf5 Human Ortholog
No data available
Associated With taf5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR006594 LIS1 homology motif
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR007582 TFIID subunit TAF5, NTD2 domain
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Homologous_superfamily IPR037264 TFIID subunit TAF5, NTD2 domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length G-protein beta WD-40 repeat LIS1 homology motif TFIID subunit TAF5, NTD2 domain TFIID subunit TAF5, NTD2 domain superfamily WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:Q32PW4 743
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA taf5-201 (1) Ensembl 2,701 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations