Gene

ttc39c

ID
ZDB-GENE-050522-194
Name
tetratricopeptide repeat domain 39C
Symbol
ttc39c Nomenclature History
Previous Names
  • si:ch73-264b7.2
  • si:dkey-121a11.7
  • zgc:110162
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Involved in cilium assembly; determination of heart left/right asymmetry; and otolith morphogenesis. Is expressed in nervous system and trigeminal placode. Orthologous to human TTC39C (tetratricopeptide repeat domain 39C).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Xu et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ttc39c Human Ortholog
No data available
Associated With ttc39c Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR019412 Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Domain Details Per Protein
Protein Length Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39 Tetratricopeptide-like helical domain superfamily
UniProtKB:Q1LXE6 579
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ttc39c-201 (1) Ensembl 1,006 nt
mRNA ttc39c-202 (1) Ensembl 4,309 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations