Gene

abcg4a

ID

ZDB-GENE-050517-39

Name

ATP-binding cassette, sub-family G (WHITE), member 4a

Symbol

abcg4a Nomenclature History

Previous Names

abcg1a (1)
abcg4
si:ch211-117m20.3

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to localize to plasma membrane. Orthologous to human ABCG4 (ATP binding cassette subfamily G member 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With abcg4a Human Ortholog

No data available

Associated With abcg4a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017871	ABC transporter-like, conserved site
Domain	IPR003439	ABC transporter-like, ATP-binding domain
Domain	IPR003593	AAA+ ATPase domain
Domain	IPR013525	ABC-2 type transporter, transmembrane domain
Domain	IPR043926	ABC transporter family G domain
Family	IPR050352	ATP-binding cassette subfamily G transporters
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase

Domain Details Per Protein

Protein	Length	AAA+ ATPase domain	ABC-2 type transporter, transmembrane domain	ABC transporter family G domain	ABC transporter-like, ATP-binding domain	ABC transporter-like, conserved site	ATP-binding cassette subfamily G transporters	P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A2BFT1 InterPro	641

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	abcg4a-202 (1) Ensembl	Ensembl	2,424 nt	Select Tool
mRNA	abcg4a-203 (1) Ensembl	Ensembl	1,926 nt	Select Tool ZFIN BLAST
ncRNA	abcg4a-002 (1) Ensembl	Ensembl	500 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations