Gene
cngb1a
- ID
- ZDB-GENE-050419-164
- Name
- cyclic nucleotide gated channel subunit beta 1a
- Symbol
- cngb1a Nomenclature History
- Previous Names
-
- si:ch211-160j6.1
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Predicted to have cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Predicted to be involved in cation transmembrane transport and visual perception. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in retinitis pigmentosa and retinitis pigmentosa 45. Orthologous to human CNGB1 (cyclic nucleotide gated channel subunit beta 1).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
retinitis pigmentosa 45 | Alliance | Retinitis pigmentosa 45 | 613767 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR018488 | Cyclic nucleotide-binding, conserved site |
Domain | IPR000595 | Cyclic nucleotide-binding domain |
Family | IPR050866 | Cyclic nucleotide-gated cation channel |
Homologous_superfamily | IPR014710 | RmlC-like jelly roll fold |
Homologous_superfamily | IPR018490 | Cyclic nucleotide-binding domain superfamily |
Domain Details Per Protein
Protein | Length | Cyclic nucleotide-binding, conserved site | Cyclic nucleotide-binding domain | Cyclic nucleotide-binding domain superfamily | Cyclic nucleotide-gated cation channel | RmlC-like jelly roll fold |
---|---|---|---|---|---|---|
UniProtKB:A0A8M3AV53
|
1313 | |||||
UniProtKB:A0A8M3B354
|
1321 | |||||
UniProtKB:A0A8N7TBM6
|
1326 | |||||
UniProtKB:A0A8M3AJU1
|
1325 | |||||
UniProtKB:A0A8M3AJU4
|
1288 | |||||
UniProtKB:A0A8M3AS70
|
1302 | |||||
UniProtKB:A0A8M3AKM9
|
1314 | |||||
UniProtKB:A0A8M2B661
|
761 | |||||
UniProtKB:A0A8M9PMQ4
|
1307 | |||||
UniProtKB:A0A8M3B358
|
1034 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
cngb1a-201
(1)
|
Ensembl | 1,837 nt | ||
mRNA |
cngb1a-202
(1)
|
Ensembl | 2,469 nt |
Interactions and Pathways
No data available
Plasmids
No data available