Gene

lbx1b

ID
ZDB-GENE-050309-27
Name
ladybird homeobox 1b
Symbol
lbx1b Nomenclature History
Previous Names
  • lbx1
  • lbx1a (1)
  • im:7139117
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in convergent extension and regulation of Wnt signaling pathway. Predicted to localize to nucleus. Is expressed in nervous system; neural plate; neural tube; pectoral fin; and spinal cord neural keel. Orthologous to human LBX1 (ladybird homeobox 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Juárez-Morales et al., 2021
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lbx1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Central hypoventilation syndrome, congenital, 3 619483
Associated With lbx1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000047 Helix-turn-helix motif
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Family IPR051892 LBX Family Transcription Factors
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Helix-turn-helix motif Homedomain-like superfamily Homeobox, conserved site Homeodomain LBX Family Transcription Factors
UniProtKB:E7FDX5 265
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lbx1b-201 (1) Ensembl 1,619 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations