Gene

celf5a

ID

ZDB-GENE-050208-746

Name

cugbp, Elav-like family member 5a

Symbol

celf5a Nomenclature History

Previous Names

celf5
brunol5
si:ch211-202d4.1

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splice site selection and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within mRNA processing. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; neural tube; and retina. Orthologous to human CELF5 (CUGBP Elav-like family member 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu847 (11 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With celf5a Human Ortholog

No data available

Associated With celf5a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR034648	CELF-3/4/5/6, RNA recognition motif 1
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	CELF-3/4/5/6, RNA recognition motif 1	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain
UniProtKB:A0A8M9P4B2 InterPro	551
UniProtKB:A0A8M9PVD1 InterPro	532
UniProtKB:A0A8M9P4B4 InterPro	542
UniProtKB:A0A8M9PVC6 InterPro	544
UniProtKB:B3DJA7 InterPro	528
UniProtKB:A0A8M9PVC1 InterPro	552
UniProtKB:A0A8M6YVG1 InterPro	539
UniProtKB:A0A8M9PJM3 InterPro	545
UniProtKB:A0A8M6YXB0 InterPro	537
UniProtKB:A0A8M9PJM7 InterPro	534
UniProtKB:A0A8M9PDY0 InterPro	550
UniProtKB:A0A8M9PRU9 InterPro	551
UniProtKB:A0A8M9PDY4 InterPro	535
UniProtKB:A0A8M6YUY3 InterPro	520
UniProtKB:A0A8M9PRV4 InterPro	543