Gene

gldn

ID

ZDB-GENE-050119-4

Name

gliomedin

Symbol

gldn Nomenclature History

Previous Names

collomin
colm

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

Predicted to be involved in clustering of voltage-gated sodium channels. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome. Orthologous to human GLDN (gliomedin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gldn Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Lethal congenital contracture syndrome 11	617194

Associated With gldn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003112	Olfactomedin-like domain
Family	IPR050605	Olfactomedin-like domain-containing protein
Repeat	IPR008160	Collagen triple helix repeat

Domain Details Per Protein

Protein	Length	Collagen triple helix repeat	Olfactomedin-like domain	Olfactomedin-like domain-containing protein
UniProtKB:F2Z4S9 InterPro	542
UniProtKB:A0A8M9P157 InterPro	564

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	gldn-201 (1) Ensembl	Ensembl		1,629 nt	Select Tool ZFIN BLAST
mRNA	gldn-202 (1) Ensembl	Ensembl		2,056 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations