Gene
srsf6b
- ID
- ZDB-GENE-041219-1
- Name
- serine and arginine rich splicing factor 6b
- Symbol
- srsf6b Nomenclature History
- Previous Names
-
- sfrs6
- sfrs6b
- wu:faa54g02
- wu:fc17h09
- zgc:103497
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Description
- Predicted to have mRNA binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to nuclear speck. Human ortholog(s) of this gene implicated in proliferative diabetic retinopathy and spermatogenic failure 3. Orthologous to human SRSF6 (serine and arginine rich splicing factor 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | SRSF6, RNA recognition motif 1 |
|---|---|---|---|---|---|
|
UniProtKB:A0A8M9QHM8
|
222 | ||||
|
UniProtKB:Q5M9N3
|
355 | ||||
|
UniProtKB:A0A8M9QLL5
|
289 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
srsf6b-203
(1)
|
Ensembl | 1,084 nt | ||
| mRNA |
srsf6b-201
(1)
|
Ensembl | 2,496 nt | ||
| ncRNA |
srsf6b-002
(1)
|
Ensembl | 808 nt | ||
| ncRNA |
srsf6b-004
(1)
|
Ensembl | 713 nt |
Interactions and Pathways
No data available
Plasmids
No data available