Gene

gtf2e1

ID

ZDB-GENE-041210-221

Name

general transcription factor IIE, polypeptide 1, alpha

Symbol

gtf2e1 Nomenclature History

Previous Names

si:ch211-194d6.2

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have RNA polymerase II complex binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and transcriptional open complex formation at RNA polymerase II promoter. Predicted to localize to transcription factor TFIIE complex. Orthologous to human GTF2E1 (general transcription factor IIE subunit 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gtf2e1 Human Ortholog

No data available

Associated With gtf2e1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002853	Transcription initiation factor IIE subunit alpha, N-terminal
Domain	IPR017919	Transcription factor TFE/TFIIEalpha HTH domain
Domain	IPR021600	Transcription factor TFIIE alpha subunit, C-terminal
Domain	IPR024550	TFIIEalpha/SarR/Rpc3 HTH domain
Family	IPR039997	Transcription factor E
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type

Domain Details Per Protein

Protein	Length	TFIIEalpha/SarR/Rpc3 HTH domain	Transcription factor E	Transcription factor TFE/TFIIEalpha HTH domain	Transcription factor TFIIE alpha subunit, C-terminal	Transcription initiation factor IIE subunit alpha, N-terminal	Zinc finger, RING/FYVE/PHD-type
UniProtKB:Q5SQE1 InterPro	447

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	gtf2e1-201 (1) Ensembl	Ensembl	6,265 nt	Select Tool ZFIN BLAST
mRNA	gtf2e1-202 (1) Ensembl	Ensembl	1,738 nt	Select Tool ZFIN BLAST
mRNA	gtf2e1-203 (1) Ensembl	Ensembl	827 nt	Select Tool ZFIN BLAST
mRNA	gtf2e1-204 (1) Ensembl	Ensembl	648 nt	Select Tool ZFIN BLAST
mRNA	gtf2e1-205 (1) Ensembl	Ensembl	2,211 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations