Gene

zmynd8

ID

ZDB-GENE-041119-1

Name

zinc finger, MYND-type containing 8

Symbol

zmynd8 Nomenclature History

Previous Names

prkcbp1

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Orthologous to human ZMYND8 (zinc finger MYND-type containing 8).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zmynd8 Human Ortholog

No data available

Associated With zmynd8 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR019786	Zinc finger, PHD-type, conserved site
Domain	IPR000313	PWWP domain
Domain	IPR001487	Bromodomain
Domain	IPR001965	Zinc finger, PHD-type
Domain	IPR002893	Zinc finger, MYND-type
Domain	IPR019787	Zinc finger, PHD-finger
Domain	IPR037967	ZMYND8, Bromo domain
Domain	IPR044075	PRKCBP1, PHD finger
Family	IPR021931	MYND-type zinc finger-containing chromatin reader ZMYND8
Homologous_superfamily	IPR011011	Zinc finger, FYVE/PHD-type
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR036427	Bromodomain-like superfamily

Domain Details Per Protein

Protein	Length	Bromodomain	Bromodomain-like superfamily	MYND-type zinc finger-containing chromatin reader ZMYND8	PRKCBP1, PHD finger	PWWP domain	Zinc finger, FYVE/PHD-type	Zinc finger, MYND-type	Zinc finger, PHD-finger	Zinc finger, PHD-type	Zinc finger, PHD-type, conserved site	Zinc finger, RING/FYVE/PHD-type	ZMYND8, Bromo domain
UniProtKB:A0A0R4ISB9 InterPro	1201
UniProtKB:A0A2R8Q412 InterPro	1182
UniProtKB:A0A8M9Q7N0 InterPro	1175

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	zmynd8-202 (1) Ensembl	Ensembl	5,373 nt	Select Tool
mRNA	zmynd8-203 (1) Ensembl	Ensembl	6,025 nt	Select Tool ZFIN BLAST
mRNA	zmynd8-204 (1) Ensembl	Ensembl	5,902 nt	Select Tool ZFIN BLAST
ncRNA	zmynd8-002 (1) Ensembl	Ensembl	1,029 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations