Gene

sgca

ID
ZDB-GENE-041111-121
Name
sarcoglycan, alpha
Symbol
sgca Nomenclature History
Previous Names
  • im:7140706
  • im:7165146
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Predicted to localize to sarcoglycan complex. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2D and muscular dystrophy. Is expressed in several structures, including adaxial cell; alar plate midbrain region; brain; cardiovascular system; and musculature system. Orthologous to human SGCA (sarcoglycan alpha).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sgca Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal recessive limb-girdle muscular dystrophy type 2D Alliance Muscular dystrophy, limb-girdle, autosomal recessive 3 608099
Associated With sgca Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR048346 Sarcoglycan alpha/epsilon, N-terminal domain
Domain IPR048347 Sarcoglycan alpha/epsilon second domain
Family IPR008908 Sarcoglycan alpha/epsilon
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin-like superfamily Sarcoglycan alpha/epsilon Sarcoglycan alpha/epsilon, N-terminal domain Sarcoglycan alpha/epsilon second domain
UniProtKB:F8W4K0 377
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sgca-201 (1) Ensembl 350 nt
mRNA sgca-202 (1) Ensembl 1,777 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations