Gene

mysm1

ID
ZDB-GENE-041014-28
Name
Myb-like, SWIRM and MPN domains 1
Symbol
mysm1 Nomenclature History
Previous Names
  • im:7153144
  • si:ch211-59d15.8
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have histone binding activity; peptidase activity, acting on L-amino acid peptides; and transcription coactivator activity. Involved in cranial skeletal system development. Predicted to localize to SWI/SNF complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Orthologous to human MYSM1 (Myb like, SWIRM and MPN domains 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With mysm1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Bone marrow failure syndrome 4 618116
Associated With mysm1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
Domain IPR001005 SANT/Myb domain
Domain IPR007526 SWIRM domain
Domain IPR017884 SANT domain
Domain IPR017930 Myb domain
Domain IPR037518 MPN domain
Family IPR050242 JAMM/MPN+ metalloenzymes, peptidase M67A
Homologous_superfamily IPR009057 Homedomain-like superfamily
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily JAB1/MPN/MOV34 metalloenzyme domain JAMM/MPN+ metalloenzymes, peptidase M67A MPN domain Myb domain SANT domain SANT/Myb domain SWIRM domain Winged helix-like DNA-binding domain superfamily
UniProtKB:A0A8M9P2N0 828
UniProtKB:Q5RGA4 822
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA mysm1-201 (1) Ensembl 3,666 nt
mRNA mysm1-202 (1) Ensembl 6,758 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations