Gene
smyd2b
- ID
- ZDB-GENE-041001-201
- Name
- SET and MYND domain containing 2b
- Symbol
- smyd2b Nomenclature History
- Previous Names
-
- si:dkey-121j17.3 (1)
- zgc:136609
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to have RNA polymerase II complex binding activity and histone methyltransferase activity (H3-K36 specific). Involved in heart contraction and heart development. Predicted to localize to cytosol and nucleus. Is expressed in muscle cell and somite. Orthologous to human SMYD2 (SET and MYND domain containing 2).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 4 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001214 | SET domain |
Domain | IPR002893 | Zinc finger, MYND-type |
Domain | IPR044419 | SMYD2, SET domain |
Family | IPR050869 | Histone-lysine N-methyltransferase |
Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
Homologous_superfamily | IPR046341 | SET domain superfamily |
Domain Details Per Protein
Protein | Length | Histone-lysine N-methyltransferase | SET domain | SET domain superfamily | SMYD2, SET domain | Tetratricopeptide-like helical domain superfamily | Zinc finger, MYND-type |
---|---|---|---|---|---|---|---|
UniProtKB:T1ECS2
|
437 | ||||||
UniProtKB:Q5RGL7
|
434 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
smyd2b-201
(1)
|
Ensembl | 1,553 nt | ||
mRNA |
smyd2b-202
(1)
|
Ensembl | 2,812 nt | ||
mRNA |
smyd2b-203
(1)
|
Ensembl | 760 nt | ||
mRNA |
smyd2b-204
(1)
|
Ensembl | 5,568 nt |
Interactions and Pathways
No data available
Plasmids
No data available