Gene

opn5

ID
ZDB-GENE-041001-179
Name
opsin 5
Symbol
opn5 Nomenclature History
Previous Names
  • Opn5m (1)
  • neuropsin (1)
  • si:ch211-105n9.2 (1)
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Exhibits 11-cis retinal binding activity and all-trans retinal binding activity. Involved in absorption of visible light. Predicted to localize to integral component of plasma membrane and photoreceptor outer segment. Is expressed in several structures, including gill; heart; integument; nervous system; and testis. Orthologous to human OPN5 (opsin 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With opn5 Human Ortholog
No data available
Associated With opn5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR027430 Visual pigments (opsins) retinal binding site
Domain IPR017452 GPCR, rhodopsin-like, 7TM
Family IPR000276 G protein-coupled receptor, rhodopsin-like
Family IPR050125 G-protein coupled receptor opsins
Domain Details Per Protein
Protein Length GPCR, rhodopsin-like, 7TM G-protein coupled receptor opsins G protein-coupled receptor, rhodopsin-like Visual pigments (opsins) retinal binding site
UniProtKB:E6P6L8 352
UniProtKB:Q5RIV6 352
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA opn5-201 (1) Ensembl 1,206 nt
mRNA opn5-202 (1) Ensembl 1,516 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations