Gene

sf3a3

ID
ZDB-GENE-040908-1
Name
splicing factor 3a, subunit 3
Symbol
sf3a3 Nomenclature History
Previous Names
  • wu:fi15a06
  • wu:fj94f01
  • zgc:110227
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Involved in hematopoietic stem cell differentiation. Predicted to localize to spliceosomal complex. Orthologous to human SF3A3 (splicing factor 3a subunit 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sf3a3 Human Ortholog
No data available
Associated With sf3a3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000690 Matrin/U1-C, C2H2-type zinc finger
Domain IPR021966 Splicing factor SF3a60 binding domain
Domain IPR024598 Splicing factor SF3a60 /Prp9 subunit, C-terminal
Domain IPR025086 SDE2/SF3A3, SAP domain
Domain IPR031774 SF3A3 domain
Family IPR051421 RNA Processing and DNA Damage Response Regulator
Domain Details Per Protein
Protein Length Matrin/U1-C, C2H2-type zinc finger RNA Processing and DNA Damage Response Regulator SDE2/SF3A3, SAP domain SF3A3 domain Splicing factor SF3a60 binding domain Splicing factor SF3a60 /Prp9 subunit, C-terminal
UniProtKB:Q6DRK2 501
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sf3a3-201 (1) Ensembl 6,247 nt
mRNA sf3a3-202 (1) Ensembl 2,016 nt
mRNA sf3a3-203 (1) Ensembl 2,223 nt
mRNA sf3a3-204 (1) Ensembl 2,221 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations