Gene

tcf25

ID

ZDB-GENE-040905-2

Name

transcription factor 25 (basic helix-loop-helix)

Symbol

tcf25 Nomenclature History

Previous Names

zgc:101131 (1)

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

Predicted to have DNA-binding transcription factor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in lens; mesoderm; notochord; and somite. Orthologous to human TCF25 (transcription factor 25).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

8 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:101131 (1 image)
IMAGE:7157357 (13 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tcf25 Human Ortholog

No data available

Associated With tcf25 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006994	TCF25/Rqc1
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily

Domain Details Per Protein

Protein	Length	TCF25/Rqc1	Tetratricopeptide-like helical domain superfamily
UniProtKB:Q68EJ4 InterPro	650
UniProtKB:A0A8M2B5S3 InterPro	645

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	tcf25-201 (1) Ensembl	Ensembl		2,225 nt	Select Tool ZFIN BLAST
mRNA	tcf25-202 (1) Ensembl	Ensembl		2,184 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations