Gene

opn8c

ID

ZDB-GENE-040724-51

Name

opsin 8, group member c

Symbol

opn8c Nomenclature History

Previous Names

novopsin-9 (1)
Opn5L2c (1)
si:dkey-30h14.3

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have G protein-coupled photoreceptor activity. Involved in phototransduction. Predicted to localize to integral component of plasma membrane and photoreceptor outer segment. Is expressed in several structures, including brain; eye; heart; integument; and testis.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from Davies et al., 2015

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With opn8c Human Ortholog

No data available

Associated With opn8c Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR017452	GPCR, rhodopsin-like, 7TM
Family	IPR000276	G protein-coupled receptor, rhodopsin-like
Family	IPR050125	G-protein coupled receptor opsins

Domain Details Per Protein

Protein	Length	GPCR, rhodopsin-like, 7TM	G-protein coupled receptor opsins	G protein-coupled receptor, rhodopsin-like
UniProtKB:F1R302 InterPro	398

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	opn8c-201 (1) Ensembl	Ensembl		5,863 nt	Select Tool ZFIN BLAST
mRNA	opn8c-202 (1) Ensembl	Ensembl		1,027 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations