Gene

valopb

ID
ZDB-GENE-040724-41
Name
vertebrate ancient long opsin b
Symbol
valopb Nomenclature History
Previous Names
  • va2 (1)
  • si:rp71-1c10.4 (1)
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Exhibits photoreceptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; cellular response to light stimulus; and phototransduction. Predicted to localize to integral component of plasma membrane and photoreceptor outer segment. Is expressed in several structures, including brain; digestive system; eye; gonad; and heart.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Hang et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With valopb Human Ortholog
No data available
Associated With valopb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR027430 Visual pigments (opsins) retinal binding site
Domain IPR017452 GPCR, rhodopsin-like, 7TM
Family IPR000276 G protein-coupled receptor, rhodopsin-like
Family IPR001760 Opsin
Family IPR050125 G-protein coupled receptor opsins
Domain Details Per Protein
Protein Length GPCR, rhodopsin-like, 7TM G-protein coupled receptor opsins G protein-coupled receptor, rhodopsin-like Opsin Visual pigments (opsins) retinal binding site
UniProtKB:A8YXX6 392
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA valopb-201 (1) Ensembl 1,298 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations