Gene

slc30a9

ID

ZDB-GENE-040724-254

Name

solute carrier family 30 member 9

Symbol

slc30a9 Nomenclature History

Previous Names

si:ch211-240l14.4
zgc:92098 (1)
ZnT9 (1)

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to have several functions, including nuclear receptor binding activity; nuclear receptor transcription coactivator activity; and zinc ion transmembrane transporter activity. Predicted to be involved in cellular zinc ion homeostasis; positive regulation of transcription by RNA polymerase II; and zinc ion transport. Predicted to localize to several cellular components, including cytoplasmic vesicle; cytoskeleton; and endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 4 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7153183 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc30a9 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Birk-Landau-Perez syndrome	617595

Associated With slc30a9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR002524	Cation efflux protein
Family	IPR040177	Proton-coupled zinc antiporter SLC30A9
Homologous_superfamily	IPR009061	Putative DNA-binding domain superfamily
Homologous_superfamily	IPR027469	Cation efflux transmembrane domain superfamily
Homologous_superfamily	IPR037129	XPA domain superfamily

Domain Details Per Protein

Protein	Length	Cation efflux protein	Cation efflux transmembrane domain superfamily	Proton-coupled zinc antiporter SLC30A9	Putative DNA-binding domain superfamily	XPA domain superfamily
UniProtKB:Q5PQZ3 InterPro	573

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	slc30a9-202 (1) Ensembl	Ensembl	505 nt	Select Tool
mRNA	slc30a9-201 (1) Ensembl	Ensembl	3,259 nt	Select Tool
mRNA	slc30a9-203 (1) Ensembl	Ensembl	561 nt	Select Tool
mRNA	slc30a9-204 (1) Ensembl	Ensembl	4,912 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations