Gene
csdc2a
- ID
- ZDB-GENE-040718-442
- Name
- cold shock domain containing C2, RNA binding a
- Symbol
- csdc2a Nomenclature History
- Previous Names
-
- csdc2
- zgc:91826
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to have mRNA 3'-UTR binding activity. Predicted to be involved in regulation of mRNA stability. Predicted to localize to cytoplasm. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human CSDC2 (cold shock domain containing C2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 5 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7141292 (6 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019844 | Cold-shock domain, conserved site |
| Domain | IPR002059 | Cold-shock protein Csp, DNA-binding |
| Domain | IPR011129 | Cold-shock domain |
| Family | IPR052069 | Calcium-regulated mRNA-binding domain-containing protein |
| Homologous_superfamily | IPR012340 | Nucleic acid-binding, OB-fold |
Domain Details Per Protein
| Protein | Length | Calcium-regulated mRNA-binding domain-containing protein | Cold-shock domain | Cold-shock domain, conserved site | Cold-shock protein Csp, DNA-binding | Nucleic acid-binding, OB-fold |
|---|---|---|---|---|---|---|
|
UniProtKB:Q6DGA4
|
153 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
csdc2a-201
(1)
|
Ensembl | 1,348 nt | ||
| mRNA |
csdc2a-202
(1)
|
Ensembl | 478 nt |
Interactions and Pathways
No data available
Plasmids
No data available