Gene
pdlim5a
- ID
- ZDB-GENE-040718-401
- Name
- PDZ and LIM domain 5a
- Symbol
- pdlim5a Nomenclature History
- Previous Names
-
- pdlim5
- ENH (1)
- zgc:91978
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have actin binding activity and muscle alpha-actinin binding activity. Predicted to be involved in actin cytoskeleton organization; heart development; and muscle structure development. Predicted to localize to Z disc; actin cytoskeleton; and adherens junction. Is expressed in several structures, including cephalic musculature; digestive system; dorsal aorta; nervous system; and notochord. Orthologous to human PDLIM5 (PDZ and LIM domain 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from Ott et al., 2007
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | PDZ and LIM domain-containing | PDZ and LIM domain protein 1-4/Zasp-like, middle domain | PDZ domain | PDZ superfamily | Zinc finger, LIM-type |
|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M6Z6A6
|
557 | |||||
|
UniProtKB:Q6DG04
|
551 | |||||
|
UniProtKB:A0A8M9PXB6
|
440 | |||||
|
UniProtKB:A0A8M9QDR0
|
332 | |||||
|
UniProtKB:A0A8M9Q8D9
|
445 | |||||
|
UniProtKB:A0A8M9Q337
|
439 | |||||
|
UniProtKB:A0A0R4IN44
|
551 | |||||
|
UniProtKB:A0A8M9QDQ6
|
446 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pdlim5a-201
(1)
|
Ensembl | 3,781 nt | ||
| mRNA |
pdlim5a-202
(1)
|
Ensembl | 1,659 nt | ||
| mRNA |
pdlim5a-203
(1)
|
Ensembl | 2,944 nt | ||
| mRNA |
pdlim5a-204
(1)
|
Ensembl | 546 nt | ||
| mRNA |
pdlim5a-205
(1)
|
Ensembl | 4,208 nt |
Interactions and Pathways
No data available
Plasmids
No data available