Gene

sub1b

ID
ZDB-GENE-040718-209
Name
SUB1 regulator of transcription b
Symbol
sub1b Nomenclature History
Previous Names
  • sub1 (1)
  • rpo2tc1 (1)
  • zgc:92831
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have transcription coactivator activity. Predicted to be involved in positive regulation of transcription initiation from RNA polymerase II promoter. Predicted to localize to nucleus and transcription factor complex. Orthologous to human SUB1 (SUB1 regulator of transcription).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Li et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sub1b Human Ortholog
No data available
Associated With sub1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003173 Transcriptional coactivator p15 (PC4), C-terminal
Family IPR045125 RNA polymerase II transcriptional coactivator Sub1/Tcp4-like
Homologous_superfamily IPR009044 ssDNA-binding transcriptional regulator
Domain Details Per Protein
Protein Length RNA polymerase II transcriptional coactivator Sub1/Tcp4-like ssDNA-binding transcriptional regulator Transcriptional coactivator p15 (PC4), C-terminal
UniProtKB:Q6DGP6 124
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sub1b-201 (1) Ensembl 871 nt
mRNA sub1b-202 (1) Ensembl 2,932 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations