Gene

snx5

ID
ZDB-GENE-040426-2857
Name
sorting nexin 5
Symbol
snx5 Nomenclature History
Previous Names
  • id:ibd5091
  • wu:fa66c10
  • wu:fi28h04
  • zgc:55769 (1)
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have dynactin binding activity and phosphatidylinositol binding activity. Involved in several processes, including Notch signaling pathway; animal organ development; and blood vessel morphogenesis. Localizes to early endosome. Is expressed in several structures, including cardiovascular system; hematopoietic system; mesoderm; optic tectum; and presumptive blood. Orthologous to human SNX5 (sorting nexin 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snx5 Human Ortholog
No data available
Associated With snx5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001683 Phox homology
Domain IPR015404 Sorting nexin/Vps5-like, C-terminal
Family IPR014637 Sorting nexin-5/6/32
Homologous_superfamily IPR027267 AH/BAR domain superfamily
Homologous_superfamily IPR036871 PX domain superfamily
Domain Details Per Protein
Protein Length AH/BAR domain superfamily Phox homology PX domain superfamily Sorting nexin-5/6/32 Sorting nexin/Vps5-like, C-terminal
UniProtKB:Q803H8 399
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA snx5-201 (1) Ensembl 2,582 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations