Gene

ssbp3b

ID
ZDB-GENE-040426-2801
Name
single stranded DNA binding protein 3b
Symbol
ssbp3b Nomenclature History
Previous Names
  • SSDP1a (1)
  • id:ibd1109
  • zgc:63791
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Predicted to have single-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in immature eye and nervous system. Orthologous to human SSBP3 (single stranded DNA binding protein 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ssbp3b Human Ortholog
No data available
Associated With ssbp3b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR006594 LIS1 homology motif
Family IPR008116 Sequence-specific single-strand DNA-binding protein
Domain Details Per Protein
Protein Length LIS1 homology motif Sequence-specific single-strand DNA-binding protein
UniProtKB:D0EWT5 373
UniProtKB:A0A8M3B4R8 348
UniProtKB:Q6PGU6 349
UniProtKB:A0A8M2BEV3 372
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ssbp3b-201 (1) Ensembl 2,688 nt
mRNA ssbp3b-202 (1) Ensembl 3,144 nt
mRNA ssbp3b-203 (1) Ensembl 268 nt
mRNA ssbp3b-204 (1) Ensembl 859 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations