Gene

rab5b

ID
ZDB-GENE-040426-2593
Name
RAB5B, member RAS oncogene family
Symbol
rab5b Nomenclature History
Previous Names
  • zgc:76978
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have GTPase activity. Predicted to be involved in several processes, including Rab protein signal transduction; intracellular protein transport; and regulation of endocytosis. Predicted to localize to early endosome and endocytic vesicle. Is expressed in pronephric duct; pronephric mesoderm; pronephros; telencephalon; and yolk syncytial layer. Orthologous to human RAB5B (RAB5B, member RAS oncogene family).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Kenyon et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rab5b Human Ortholog
No data available
Associated With rab5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR001806 Small GTPase
Family IPR050227 Ras-related protein Rab
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase Ras-related protein Rab Small GTPase Small GTP-binding domain
UniProtKB:Q6NYD6 214
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rab5b-201 (1) Ensembl 2,381 nt
mRNA rab5b-202 (1) Ensembl 2,742 nt
mRNA rab5b-203 (1) Ensembl 637 nt
mRNA rab5b-204 (1) Ensembl 888 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations