Gene

srsf9

ID
ZDB-GENE-040426-2397
Name
serine and arginine rich splicing factor 9
Symbol
srsf9 Nomenclature History
Previous Names
  • zgc:77449 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to nuclear speck. Orthologous to human SRSF9 (serine and arginine rich splicing factor 9).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srsf9 Human Ortholog
No data available
Associated With srsf9 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034503 SRSF9, RNA recognition motif 1
Family IPR050374 RRT5/SRSF/Splicing Factor SR
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain RRT5/SRSF/Splicing Factor SR SRSF9, RNA recognition motif 1
UniProtKB:F1QVC6 245
UniProtKB:Q6NXE0 244
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA srsf9-201 (1) Ensembl 1,423 nt
mRNA srsf9-202 (1) Ensembl 1,243 nt
ncRNA srsf9-003 (1) Ensembl 1,062 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations