Gene

sdf4

ID
ZDB-GENE-040426-2061
Name
stromal cell derived factor 4
Symbol
sdf4 Nomenclature History
Previous Names
  • wu:fb66d06 (1)
  • wu:fd46e11
  • zgc:56577 (1)
  • zgc:76916
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Involved in sprouting angiogenesis. Predicted to localize to endoplasmic reticulum. Is expressed in several structures, including epidermis; hatching gland; notochord; periderm; and polster. Orthologous to human SDF4 (stromal cell derived factor 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Delcourt et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sdf4 Human Ortholog
No data available
Associated With sdf4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Domain IPR027240 Calcium-binding protein CAB45, EF-hand
Homologous_superfamily IPR011992 EF-hand domain pair
Domain Details Per Protein
Protein Length Calcium-binding protein CAB45, EF-hand EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair
UniProtKB:Q7ZUC2 356
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sdf4-201 (1) Ensembl 2,406 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations