Gene
snx27b
- ID
- ZDB-GENE-040426-1529
- Name
- sorting nexin 27b
- Symbol
- snx27b Nomenclature History
- Previous Names
-
- snx27
- zgc:66094
- zgc:77922
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to have phosphatidylinositol binding activity. Predicted to be involved in intracellular protein transport and retrograde transport, endosome to plasma membrane. Predicted to localize to early endosome. Orthologous to human SNX27 (sorting nexin 27).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:66094 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Yong et al., 2021
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000159 | Ras-associating domain |
| Domain | IPR001478 | PDZ domain |
| Domain | IPR001683 | Phox homology |
| Domain | IPR037827 | SNX27, atypical FERM-like domain |
| Domain | IPR037833 | SNX27, PX domain |
| Domain | IPR037835 | SNX27, RA domain |
| Homologous_superfamily | IPR029071 | Ubiquitin-like domain superfamily |
| Homologous_superfamily | IPR036034 | PDZ superfamily |
| Homologous_superfamily | IPR036871 | PX domain superfamily |
Domain Details Per Protein
| Protein | Length | PDZ domain | PDZ superfamily | Phox homology | PX domain superfamily | Ras-associating domain | SNX27, atypical FERM-like domain | SNX27, PX domain | SNX27, RA domain | Ubiquitin-like domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q6P3G2
|
569 | |||||||||
|
UniProtKB:A0A8M2B4E4
|
566 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
snx27b-201
(1)
|
Ensembl | 2,140 nt |
Interactions and Pathways
No data available
Plasmids
No data available