Gene

prdm9

ID

ZDB-GENE-040426-1319

Name

PR domain containing 9

Symbol

prdm9 Nomenclature History

Previous Names

zgc:63970

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have DNA binding activity; histone-lysine N-methyltransferase activity; and protein homodimerization activity. Predicted to be involved in several processes, including histone lysine methylation; meiosis I; and positive regulation of histone methylation. Predicted to colocalize with histone methyltransferase complex. Orthologous to human PRDM9 (PR/SET domain 9).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:63970 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With prdm9 Human Ortholog

No data available

Associated With prdm9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001214	SET domain
Domain	IPR013087	Zinc finger C2H2-type
Domain	IPR044417	PRDM7/PRDM9, PR/SET domain
Family	IPR050331	Zinc finger
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily
Homologous_superfamily	IPR046341	SET domain superfamily