Gene

nup98

ID
ZDB-GENE-040426-1180
Name
nucleoporin 98 and 96 precursor
Symbol
nup98 Nomenclature History
Previous Names
  • im:7151238
  • zgc:63593
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and nuclear localization sequence binding activity. Involved in enteric nervous system development. Predicted to localize to nuclear pore cytoplasmic filaments. Human ortholog(s) of this gene implicated in T-cell acute lymphoblastic leukemia. Is expressed in central nervous system and intestine. Orthologous to human NUP98 (nucleoporin 98 and 96 precursor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nup98 Human Ortholog
No data available
Associated With nup98 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR007230 Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain
Domain IPR021967 Nuclear pore complex protein NUP96, C-terminal domain
Family IPR037665 Nucleoporin peptidase S59-like
Homologous_superfamily IPR036903 Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily
Domain Details Per Protein
Protein Length Nuclear pore complex protein NUP96, C-terminal domain Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily Nucleoporin peptidase S59-like
UniProtKB:A0A0R4IAQ8 1807
UniProtKB:E7F981 1814
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nup98-201 (1) Ensembl 2,435 nt
mRNA nup98-202 (1) Ensembl 6,806 nt
mRNA nup98-203 (1) Ensembl 6,756 nt
mRNA nup98-205 (1) Ensembl 8,319 nt
ncRNA nup98-003 (1) Ensembl 912 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations