Gene

tra2b

ID
ZDB-GENE-040426-1094
Name
transformer 2 beta homolog
Symbol
tra2b Nomenclature History
Previous Names
  • sfrs10
  • zgc:56612 (1)
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to localize to spliceosomal complex. Is expressed in brain. Orthologous to human TRA2B (transformer 2 beta homolog).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tra2b Human Ortholog
No data available
Associated With tra2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Family IPR050441 RNA-binding motif
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA-binding motif RNA recognition motif domain
UniProtKB:Q7ZUG9 278
UniProtKB:A0A8M2BEY8 173
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tra2b-201 (1) Ensembl 1,312 nt
mRNA tra2b-206 (1) Ensembl 976 nt
ncRNA tra2b-002 (1) Ensembl 598 nt
ncRNA tra2b-003 (1) Ensembl 918 nt
ncRNA tra2b-004 (1) Ensembl 793 nt
ncRNA tra2b-005 (1) Ensembl 712 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations