Gene

rtraf

ID
ZDB-GENE-040426-1082
Name
RNA transcription, translation and transport factor
Symbol
rtraf Nomenclature History
Previous Names
  • zgc:56576 (1)
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and RNA polymerase II complex binding activity. Predicted to be involved in negative regulation of protein kinase activity; positive regulation of transcription by RNA polymerase II; and tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to localize to several cellular components, including microtubule cytoskeleton; perinuclear region of cytoplasm; and tRNA-splicing ligase complex. Orthologous to human RTRAF (RNA transcription, translation and transport factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rtraf Human Ortholog
No data available
Associated With rtraf Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR019265 RNA transcription, translation and transport factor protein
Domain Details Per Protein
Protein Length RNA transcription, translation and transport factor protein
UniProtKB:Q7ZUH1 242
UniProtKB:F1QKI4 242
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rtraf-201 (1) Ensembl 1,161 nt
ncRNA zgc:56576-002 (1) Ensembl 958 nt
ncRNA zgc:56576-003 (1) Ensembl 794 nt
ncRNA zgc:56576-004 (1) Ensembl 957 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations