Gene

slc31a1

ID
ZDB-GENE-040415-3
Name
solute carrier family 31 member 1
Symbol
slc31a1 Nomenclature History
Previous Names
  • CTR-1 (1)
  • ctr1 (1)
  • zgc:76839
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have copper ion transmembrane transporter activity. Involved in cellular response to estrogen stimulus; hypotonic salinity response; and response to copper ion. Predicted to localize to plasma membrane. Is expressed in gill; gut; liver; locus coeruleus; and yolk syncytial layer. Orthologous to human SLC31A1 (solute carrier family 31 member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Soma et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With slc31a1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodegeneration and seizures due to copper transport defect 620306
Associated With slc31a1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR007274 Ctr copper transporter
Domain Details Per Protein
Protein Length Ctr copper transporter
UniProtKB:F1QKH1 188
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc31a1-201 (1) Ensembl 4,560 nt
mRNA slc31a1-202 (1) Ensembl 4,562 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations