Gene
satb1a
- ID
- ZDB-GENE-031010-36
- Name
- SATB homeobox 1a
- Symbol
- satb1a Nomenclature History
- Previous Names
-
- sb:cb955
- si:ch211-195k18.2 (1)
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in chromatin remodeling and negative regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in basal plate midbrain region and nervous system. Orthologous to human SATB1 (SATB homeobox 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb955 (9 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Thyme et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR003350 | CUT domain |
Domain | IPR032355 | SATB, CUT1-like DNA-binding domain |
Domain | IPR032392 | SATB, ubiquitin-like oligomerisation domain |
Family | IPR039673 | DNA-binding protein SATB1/SATB2 |
Homologous_superfamily | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily |
Homologous_superfamily | IPR038216 | SATB, CUTL domain superfamily |
Homologous_superfamily | IPR038224 | SATB, ULD domain superfamily |
Domain Details Per Protein
Protein | Length | CUT domain | DNA-binding protein SATB1/SATB2 | Lambda repressor-like, DNA-binding domain superfamily | SATB, CUT1-like DNA-binding domain | SATB, CUTL domain superfamily | SATB, ubiquitin-like oligomerisation domain | SATB, ULD domain superfamily |
---|---|---|---|---|---|---|---|---|
UniProtKB:Q1LUN2
|
728 | |||||||
UniProtKB:A0A8M2BHC4
|
720 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
satb1a-201
(1)
|
Havana | 2524 nt |
Interactions and Pathways
No data available
Plasmids
No data available