Gene

etv5a

ID
ZDB-GENE-030131-9572
Name
ETS variant transcription factor 5a
Symbol
etv5a Nomenclature History
Previous Names
  • etv5
  • fj87h10
  • id:ibd5133
  • wu:fj87h10
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in several processes, including hemangioblast cell differentiation; limb morphogenesis; and pronephric nephron tubule epithelial cell differentiation. Predicted to localize to nucleus. Is expressed in several structures, including mesoderm; nervous system; neural tube; pronephros; and tail bud. Orthologous to human ETV5 (ETS variant transcription factor 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
25 figures from 13 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
12 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With etv5a Human Ortholog
No data available
Associated With etv5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000418 Ets domain
Domain IPR006715 PEA3-type ETS-domain transcription factor, N-terminal
Family IPR046328 ETS family
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Ets domain ETS family PEA3-type ETS-domain transcription factor, N-terminal Winged helix DNA-binding domain superfamily Winged helix-like DNA-binding domain superfamily
UniProtKB:A0A8M9QAL5 521
UniProtKB:A0A8M9Q4H5 523
UniProtKB:F1Q6X6 522
UniProtKB:B0S6S7 524
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA etv5a-201 (1) Ensembl 3,793 nt
mRNA etv5a-202 (1) Ensembl 3,408 nt
mRNA etv5a-203 (1) Ensembl 425 nt
mRNA etv5a-204 (1) Ensembl 745 nt
mRNA etv5a-205 (1) Ensembl 1,598 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations