Gene

ddx5

ID
ZDB-GENE-030131-925
Name
DEAD (Asp-Glu-Ala-Asp) box helicase 5
Symbol
ddx5 Nomenclature History
Previous Names
  • wu:fa56a07
  • wu:fb11e01
  • wu:fb16c10
  • wu:fb53b05
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and RNA helicase activity. Predicted to localize to cytoplasm; nucleus; and ribonucleoprotein complex. Orthologous to human DDX5 (DEAD-box helicase 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from Sone et al., 2020
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ddx5 Human Ortholog
No data available
Associated With ddx5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length ATP-dependent RNA helicase DEAD-box, conserved site DEAD/DEAH box helicase domain Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain P-loop containing nucleoside triphosphate hydrolase RNA helicase, DEAD-box type, Q motif
UniProtKB:F1Q5L6 617
UniProtKB:Q6NWH7 496
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ddx5-201 (1) Ensembl 2,513 nt
mRNA ddx5-202 (1) Ensembl 744 nt
mRNA ddx5-204 (1) Ensembl 2,230 nt
mRNA ddx5-206 (1) Ensembl 3,060 nt
ncRNA ddx5-003 (1) Ensembl 372 nt
ncRNA ddx5-005 (1) Ensembl 1,965 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations