Gene
hmgb1b
- ID
- ZDB-GENE-030131-8480
- Name
- high mobility group box 1b
- Symbol
- hmgb1b Nomenclature History
- Previous Names
-
- si:dkey-1m11.1
- wu:fa96c07
- wu:fb13a05
- zgc:165618
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to enable DNA binding activity, bending. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in chromosome and nucleus. Is expressed in several structures, including axis; digestive system; intermediate cell mass of mesoderm; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis and congestive heart failure. Orthologous to human HMGB1 (high mobility group box 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 18 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | High mobility group box domain | High mobility group box domain superfamily | High Mobility Group Box (HMGB) | HMG box A DNA-binding domain, conserved site |
|---|---|---|---|---|---|
|
UniProtKB:X1WFI9
|
197 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hmgb1b-201
(1)
|
Ensembl | 605 nt | ||
| mRNA |
hmgb1b-202
(1)
|
Ensembl | 1,187 nt | ||
| mRNA |
hmgb1b-203
(1)
|
Ensembl | 768 nt | ||
| mRNA |
hmgb1b-205
(1)
|
Ensembl | 841 nt | ||
| ncRNA |
hmgb1b-003
(1)
|
Ensembl | 291 nt |
Interactions and Pathways
No data available
Plasmids
No data available