Gene

prg4a

ID
ZDB-GENE-030131-8295
Name
proteoglycan 4a
Symbol
prg4a Nomenclature History
Previous Names
  • fb08a02
  • wu:fb08a02
  • wu:fk21a06
  • zgc:56698
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have polysaccharide binding activity and scavenger receptor activity. Predicted to be involved in immune response. Human ortholog(s) of this gene implicated in camptodactyly-arthropathy-coxa vara-pericarditis syndrome and pericarditis. Is expressed in caudal fin. Orthologous to human PRG4 (proteoglycan 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Nolte et al., 2015
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With prg4a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
camptodactyly-arthropathy-coxa vara-pericarditis syndrome Alliance Camptodactyly-arthropathy-coxa vara-pericarditis syndrome 208250
Associated With prg4a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001212 Somatomedin B domain
Domain IPR020436 Somatomedin B domain, chordata
Family IPR051298 Heme transport and cell adhesion protein
Homologous_superfamily IPR036024 Somatomedin B-like domain superfamily
Homologous_superfamily IPR036375 Hemopexin-like domain superfamily
Repeat IPR018487 Hemopexin-like repeats
Domain Details Per Protein
Protein Length Heme transport and cell adhesion protein Hemopexin-like domain superfamily Hemopexin-like repeats Somatomedin B domain Somatomedin B domain, chordata Somatomedin B-like domain superfamily
UniProtKB:A0A8M1PHS8 486
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA prg4a-201 (1) Ensembl 1,956 nt
mRNA prg4a-202 (1) Ensembl 467 nt
mRNA prg4a-203 (1) Ensembl 894 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations