Gene

nt5dc1

ID

ZDB-GENE-030131-8274

Name

5'-nucleotidase domain containing 1

Symbol

nt5dc1 Nomenclature History

Previous Names

fj64b02
si:dkey-121j17.1
wu:fj64b02

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have 5'-nucleotidase activity. Orthologous to human NT5DC1 (5'-nucleotidase domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu1110 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nt5dc1 Human Ortholog

No data available

Associated With nt5dc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR008380	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
Homologous_superfamily	IPR023214	HAD superfamily
Homologous_superfamily	IPR036412	HAD-like superfamily

Domain Details Per Protein

Protein	Length	HAD-like superfamily	HAD superfamily	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
UniProtKB:A0A8M9PHH6 InterPro	370
UniProtKB:A7MBY0 InterPro	461

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	nt5dc1-201 (1) Ensembl	Ensembl		1,947 nt	Select Tool ZFIN BLAST
mRNA	nt5dc1-202 (1) Ensembl	Ensembl		1,133 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations