Gene

rnf40

ID
ZDB-GENE-030131-6607
Name
ring finger protein 40
Symbol
rnf40 Nomenclature History
Previous Names
  • si:rp71-1c10.1
  • wu:fk48a06 (1)
  • zgc:103763 (1)
  • zgc:152796
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Predicted to be involved in histone monoubiquitination. Predicted to localize to nucleus. Orthologous to human RNF40 (ring finger protein 40).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnf40 Human Ortholog
No data available
Associated With rnf40 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR013956 E3 ubiquitin ligase Bre1
Domain Details Per Protein
Protein Length E3 ubiquitin ligase Bre1
UniProtKB:Q08CR1 562
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf40-201 (1) Ensembl 3,033 nt
mRNA rnf40-202 (1) Ensembl 1,403 nt
mRNA rnf40-203 (1) Ensembl 3,803 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations