Gene

pif1

ID
ZDB-GENE-030131-4928
Name
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
Symbol
pif1 Nomenclature History
Previous Names
  • cb934 (1)
  • fe11d03
  • PIF1 homolog (1)
  • wu:fe11d03
  • zgc:56161 (1)
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have 5'-3' DNA helicase activity; ATP binding activity; and DNA binding activity. Predicted to be involved in DNA duplex unwinding and DNA replication. Predicted to localize to replication fork. Is expressed in ectoderm; head; optic tectum; pectoral fin musculature; and proliferative region. Orthologous to human PIF1 (PIF1 5'-to-3' DNA helicase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pif1 Human Ortholog
No data available
Associated With pif1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003593 AAA+ ATPase domain
Domain IPR049163 DNA helicase Pif1-like, 2B domain
Family IPR048293 DNA helicase PIF1/RRM3/pfh1
Family IPR051055 PIF1 DNA helicase
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length AAA+ ATPase domain DNA helicase Pif1-like, 2B domain DNA helicase PIF1/RRM3/pfh1 PIF1 DNA helicase P-loop containing nucleoside triphosphate hydrolase
UniProtKB:Q7ZV90 639
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pif1-201 (1) Ensembl 2,455 nt
mRNA pif1-203 (1) Ensembl 3,784 nt
ncRNA pif1-002 (1) Ensembl 954 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations