Gene

rab18a

ID
ZDB-GENE-030131-3980
Name
RAB18A, member RAS oncogene family
Symbol
rab18a Nomenclature History
Previous Names
  • fc62e07
  • wu:fc62e07
  • zgc:77145
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have GTPase activity. Involved in chordate embryonic development and eye development. Predicted to localize to Golgi apparatus. Human ortholog(s) of this gene implicated in Warburg micro syndrome 3. Is expressed in brain; heart tube; optic cup; retina; and retinal inner nuclear layer. Orthologous to human RAB18 (RAB18, member RAS oncogene family).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Bem et al., 2011
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rab18a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Warburg micro syndrome 3 Alliance Warburg micro syndrome 3 614222
Associated With rab18a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR025662 Sigma-54 interaction domain, ATP-binding site 1
Domain IPR005225 Small GTP-binding domain
Family IPR001806 Small GTPase
Family IPR050227 Ras-related protein Rab
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase Ras-related protein Rab Sigma-54 interaction domain, ATP-binding site 1 Small GTPase Small GTP-binding domain
UniProtKB:Q6P129 205
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript rab18a-202 (1) Ensembl 791 nt
mRNA rab18a-201 (1) Ensembl 2,335 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations