Gene

rif1

ID

ZDB-GENE-030131-3406

Name

replication timing regulatory factor 1

Symbol

rif1 Nomenclature History

Previous Names

fc38c03
si:dkey-89p3.2
wu:fc38c03

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to be involved in telomere maintenance. Predicted to localize to nucleus. Orthologous to human RIF1 (replication timing regulatory factor 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu1103 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rif1 Human Ortholog

No data available

Associated With rif1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR022031	Telomere-associated protein Rif1, N-terminal
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold

Domain Details Per Protein

Protein	Length	Armadillo-like helical	Armadillo-type fold	Telomere-associated protein Rif1, N-terminal
UniProtKB:A0A8M3BCF0 InterPro	2391
UniProtKB:B0UY57 InterPro	2392
UniProtKB:Q1MSY2 InterPro	2347

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rif1-201 (1) Ensembl	Ensembl	7,312 nt	Select Tool ZFIN BLAST
mRNA	rif1-202 (1) Ensembl	Ensembl	7,527 nt	Select Tool ZFIN BLAST
mRNA	rif1-203 (1) Ensembl	Ensembl	7,574 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations