Gene

s100u

ID

ZDB-GENE-030131-3121

Name

S100 calcium binding protein U

Symbol

s100u Nomenclature History

Previous Names

fc27g02
si:dkey-105n5.2 (1)
wu:fc27g02

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have calcium ion binding activity. Orthologous to human S100A16 (S100 calcium binding protein A16).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from Zhang et al., 2019

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With s100u Human Ortholog

No data available

Associated With s100u Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR018247	EF-Hand 1, calcium-binding site
Domain	IPR002048	EF-hand domain
Domain	IPR013787	S100/CaBP-9k-type, calcium binding, subdomain
Homologous_superfamily	IPR011992	EF-hand domain pair

Domain Details Per Protein

Protein	Length	EF-Hand 1, calcium-binding site	EF-hand domain	EF-hand domain pair	S100/CaBP-9k-type, calcium binding, subdomain
UniProtKB:A5WW31 InterPro	240

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	s100u-201 (1) Ensembl	Ensembl		962 nt	Select Tool ZFIN BLAST
mRNA	s100u-202 (1) Ensembl	Ensembl		2,367 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations