Gene

myom1a

ID

ZDB-GENE-030131-2856

Name

myomesin 1a (skelemin)

Symbol

myom1a Nomenclature History

Previous Names

myom1
im:7139709
wu:fc19g07
wu:fj97c07

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity; kinase binding activity; and muscle alpha-actinin binding activity. Predicted to be involved in cardiac muscle tissue morphogenesis; striated muscle cell development; and striated muscle contraction. Predicted to localize to M band; Z disc; and striated muscle thin filament. Is expressed in musculature system; pectoral fin; and somite. Orthologous to human MYOM1 (myomesin 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

14 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7139709 (7 images)
IMAGE:7160758 (8 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With myom1a Human Ortholog

No data available

Associated With myom1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013098	Immunoglobulin I-set
Family	IPR050964	Striated Muscle Structural and Regulatory Protein
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin domain subtype	Immunoglobulin I-set	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Striated Muscle Structural and Regulatory Protein
UniProtKB:A0A8M1NUG4 InterPro	1483
UniProtKB:A0A8M2BAV8 InterPro	1459

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	myom1a-203 (1) Ensembl	Ensembl	5,891 nt	Select Tool
mRNA	myom1a-205 (1) Ensembl	Ensembl	748 nt	Select Tool
ncRNA	myom1a-002 (1) Ensembl	Ensembl	415 nt	Select Tool
ncRNA	myom1a-004 (1) Ensembl	Ensembl	924 nt	Select Tool
ncRNA	myom1a-005 (1) Ensembl	Ensembl	614 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations