Gene

rps27a

ID
ZDB-GENE-030131-10018
Name
ribosomal protein S27a
Symbol
rps27a Nomenclature History
Previous Names
  • hm:zeh0386
  • ik:tdsubc_1f2
  • tdsubc_1f2
  • xx:tdsubc_1f2
  • zgc:66168
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have protein tag and ubiquitin protein ligase binding activity. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Predicted to localize to cytosolic small ribosomal subunit and nucleus. Orthologous to human RPS27A (ribosomal protein S27a).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rps27a Human Ortholog
No data available
Associated With rps27a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019954 Ubiquitin conserved site
Domain IPR000626 Ubiquitin-like domain
Domain IPR002906 Small ribosomal subunit protein eS31
Domain IPR019956 Ubiquitin domain
Family IPR050158 Ubiquitin and ubiquitin-like
Homologous_superfamily IPR011332 Zinc-binding ribosomal protein
Homologous_superfamily IPR029071 Ubiquitin-like domain superfamily
Homologous_superfamily IPR038582 Small ribosomal subunit protein eS31 eukaryotic-type superfamily
Domain Details Per Protein
Protein Length Small ribosomal subunit protein eS31 Small ribosomal subunit protein eS31 eukaryotic-type superfamily Ubiquitin and ubiquitin-like Ubiquitin conserved site Ubiquitin domain Ubiquitin-like domain Ubiquitin-like domain superfamily Zinc-binding ribosomal protein
UniProtKB:Q7SXA3 156
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rps27a-201 (1) Ensembl 668 nt
mRNA rps27a-204 (1) Ensembl 721 nt
ncRNA rps27a-003 (1) Ensembl 684 nt
ncRNA rps27a-004 (1) Ensembl 820 nt
ncRNA rps27a-005 (1) Ensembl 601 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations