Gene
capns1a
- ID
- ZDB-GENE-030113-3
- Name
- calpain, small subunit 1 a
- Symbol
- capns1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have calcium ion binding activity. Is expressed in several structures, including EVL; digestive system; epidermis; pectoral fin bud; and pronephros. Orthologous to several human genes including CAPNS1 (calpain small subunit 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 10 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb616 (25 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Pulmonary hypertension, primary, 6 | 620777 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair |
|---|---|---|---|---|
|
UniProtKB:Q1LYC9
|
216 | |||
|
UniProtKB:Q568A3
|
156 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
capns1a-201
(1)
|
Ensembl | 1,259 nt | ||
| mRNA |
capns1a-202
(1)
|
Ensembl | 1,029 nt | ||
| mRNA |
capns1a-203
(1)
|
Ensembl | 1,287 nt | ||
| ncRNA |
capns1a-003
(1)
|
Ensembl | 739 nt | ||
| ncRNA |
capns1a-005
(1)
|
Ensembl | 510 nt | ||
| ncRNA |
capns1a-006
(1)
|
Ensembl | 671 nt |
Interactions and Pathways
No data available
Plasmids
No data available