Gene
scarb2a
- ID
- ZDB-GENE-020419-29
- Name
- scavenger receptor class B, member 2a
- Symbol
- scarb2a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to enable scavenger receptor activity. Acts upstream of or within notochord development. Predicted to be located in lysosome and membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including alar plate midbrain region; axial mesoderm; hindbrain neural plate; nervous system; and notochord. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 4. Orthologous to human SCARB2 (scavenger receptor class B member 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu664 (18 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| progressive myoclonus epilepsy 4 | Alliance | Epilepsy, progressive myoclonic 4, with or without renal failure | 254900 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | CD36 family | Lysosome membrane protein II |
|---|---|---|---|
|
UniProtKB:Q8JGR8
|
531 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
scarb2a-201
(1)
|
Ensembl | 6,302 nt | ||
| mRNA |
scarb2a-202
(1)
|
Ensembl | 6,254 nt |
Interactions and Pathways
No data available
Plasmids
No data available