Gene

snrpc

ID

ZDB-GENE-020419-26

Name

small nuclear ribonucleoprotein polypeptide C

Symbol

snrpc Nomenclature History

Previous Names

chunp6909
U1C (1)
zgc:109792

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to enable pre-mRNA 5'-splice site binding activity. Acts upstream of or within regulation of alternative mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of U1 snRNP. Human ortholog(s) of this gene implicated in connective tissue disease; mixed connective tissue disease; and systemic lupus erythematosus. Orthologous to human SNRPC (small nuclear ribonucleoprotein polypeptide C).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6906904 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 6 figures from 4 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With snrpc Human Ortholog

No data available

Associated With snrpc Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000690	Matrin/U1-C, C2H2-type zinc finger
Domain	IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
Domain	IPR013085	U1-C, C2H2-type zinc finger
Family	IPR017340	U1 small nuclear ribonucleoprotein C
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily