Gene

per1a

ID
ZDB-GENE-011220-1
Name
period circadian clock 1a
Symbol
per1a Nomenclature History
Previous Names
  • per1
  • si:ch211-237l4.4
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have transcription corepressor binding activity and transcription regulatory region sequence-specific DNA binding activity. Involved in photoperiodism and response to hydrogen peroxide. Predicted to localize to cytoplasm and nucleus. Is expressed in brain. Orthologous to human PER1 (period circadian regulator 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 10 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With per1a Human Ortholog
No data available
Associated With per1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000014 PAS domain
Domain IPR013655 PAS fold-3
Domain IPR022728 Period circadian-like, C-terminal
Domain IPR048814 Period circadian protein homolog 1-3, PAS-A domain
Family IPR050760 Period circadian regulator
Homologous_superfamily IPR035965 PAS domain superfamily
Domain Details Per Protein
Protein Length PAS domain PAS domain superfamily PAS fold-3 Period circadian-like, C-terminal Period circadian protein homolog 1-3, PAS-A domain Period circadian regulator
UniProtKB:A0A8M9PTL7 1330
UniProtKB:A0A8M2BJY2 1386
UniProtKB:A0A8M2BJX1 1386
UniProtKB:Q7SZZ4 1229
UniProtKB:A0A0R4ICG0 1387
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA per1a-201 (1) Ensembl 3,690 nt
mRNA per1a-202 (1) Ensembl 4,209 nt
mRNA per1a-203 (1) Ensembl 7,377 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations